Coarse-graining microscopic strains in a harmonic, two-dimensional solid: Elasticity, nonlocal susceptibilities, and nonaffine noise
نویسندگان
چکیده
منابع مشابه
Coarse-graining intermittent intracellular transport: Two- and three-dimensional models.
Viruses and other cellular cargo that lack locomotion must rely on diffusion and cellular transport systems to navigate through a biological cell. Indeed, advances in single particle tracking have revealed that viral motion alternates between (a) diffusion in the cytoplasm and (b) active transport along microtubules. This intermittency makes quantitative analysis of trajectories difficult. Ther...
متن کاملCoarse-graining a restricted solid-on-solid model.
A procedure suggested by Vvedensky for obtaining continuum equations as the coarse-grained limit of discrete models is applied to the restricted solid-on-solid model with both adsorption and desorption. Using an expansion of the master equation, discrete Langevin equations are derived; these agree quantitatively with direct simulation of the model. From these, a continuum differential equation ...
متن کاملCoarse graining
Multiscale simulations For nearly all systems of interest to us, the most transferrable and fundamental description of matter is one that invokes quantum mechanics. At the highest level of accuracy, this amounts to solving Schrodinger’s equation for all of the subatomic particles in a system. Computationally, many approximations need to be made in order to use ab initio methods, and even these ...
متن کاملA numerical strategy for coarse-graining two-dimensional atomistic models at finite temperature: the membrane case
We present a numerical strategy to compute ensemble averages of coarse-grained two-dimensional membrane-like models. The approach consists in generalizing to these two-dimensional models a one-dimensional strategy exposed in [Blanc, Le Bris, Legoll, Patz, JNLS 2010, [6]], which is based on applying the ergodic theorem to Markov chains. This may be considered as a first step towards computing th...
متن کاملPredictive coarse-graining
Brute-force molecular dynamics simulations are limited by the exuberant number of degrees of freedom and the relatively small time-steps. As a result, only relatively small assemblies of molecules over small time spans are accessible with current and foreseeable computational capabilities. In order to overcome this limitation, coarse-grained models have been proposed which employ a much smaller...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Physical Review E
سال: 2010
ISSN: 1539-3755,1550-2376
DOI: 10.1103/physreve.82.016112